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    alpha/beta hydrolase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838071, updated on 18-Sep-2024

    Summary

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    Official Full Name
    alpha/beta hydrolase family protein
    Primary source
    TAIR:AT1G15060
    Locus tag
    AT1G15060
    See related
    Araport:AT1G15060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (5183258..5187106, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF789) Neighboring gene ncRNA Neighboring gene Class I glutamine amidotransferase-like superfamily protein Neighboring gene ncRNA Neighboring gene indole-3-acetic acid inducible 34 Neighboring gene lipid phosphate phosphatase 2 Neighboring gene tRNA-Asn

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001332146.1
    NM_001332147.1
    NM_101376.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alpha/beta hydrolase family protein
    NP_001319006.1
    • Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5183258..5187106 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332146.1 → NP_001319006.1  alpha/beta hydrolase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WGQ5, A0A384L9K6, Q8RX69, Q9XI61
      Conserved Domains (1) summary
      pfam12146
      Location:330 → 545
      Hydrolase_4; Serine aminopeptidase, S33

    2. NM_001332147.1 → NP_001321660.1  alpha/beta hydrolase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARL4, Q9XI61

    3. NM_101376.4 → NP_172960.2  alpha/beta hydrolase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172960.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WGQ5, A0A384L9K6, Q8RX69, Q9XI61
      Conserved Domains (1) summary
      pfam12146
      Location:330 → 545
      Hydrolase_4; Serine aminopeptidase, S33
    Nucleotide Protein
    Heading Accession and Version

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