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    MICOS complex subunit, putative (DUF543) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843548, updated on 18-Sep-2024

    Summary

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    Official Full Name
    MICOS complex subunit, putative (DUF543)
    Primary source
    TAIR:AT1G72170
    Locus tag
    AT1G72170
    See related
    Araport:AT1G72170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (27156321..27157809)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene PATELLIN 1 Neighboring gene Sec14p-like phosphatidylinositol transfer family protein Neighboring gene E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene D-isomer specific 2-hydroxyacid dehydrogenase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. Brugière S, et al. Phytochemistry, 2004 Jun. PMID 15276431
    2. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_105875.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    part_of MICOS complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    MICOS complex subunit, putative (DUF543)
    NP_565036.1
    • Domain of unknown function (DUF543); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF543 (InterPro:IPR007512); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF543) (TAIR:AT1G22520.1); Has 92 Blast hits to 92 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27156321..27157809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105875.5 → NP_565036.1  MICOS complex subunit, putative (DUF543) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565036.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4U8, Q8GWC7, Q8LEM0
      Conserved Domains (1) summary
      pfam04418
      Location:2 → 74
      DUF543; Domain of unknown function (DUF543)
    Nucleotide Protein
    Heading Accession and Version

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