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    UNE6 LUC7 related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821276, updated on 18-Sep-2024

    Summary

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    Official Symbol
    UNE6
    Official Full Name
    LUC7 related protein
    Primary source
    TAIR:AT3G03340
    Locus tag
    AT3G03340
    See related
    Araport:AT3G03340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T21P5.24; T21P5_24; unfertilized embryo sac 6
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    Genomic context

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    See UNE6 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (786205..790152)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene lecithin:cholesterol acyltransferase 3 Neighboring gene RNA-binding ASCH domain protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene cold-regulated protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene F-box/RNI-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Pagnussat GC, et al. Development, 2005 Feb. PMID 15634699
    2. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
    3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001337466.1
    NM_111205.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within double fertilization forming a zygote and endosperm IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in mRNA splice site recognition IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LUC7 related protein
    NP_566203.2
    • unfertilized embryo sac 6 (UNE6); CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT5G17440.1); Has 25128 Blast hits to 10547 proteins in 429 species: Archae - 23; Bacteria - 333; Metazoa - 14905; Fungi - 3154; Plants - 2060; Viruses - 86; Other Eukaryotes - 4567 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      786205..790152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337465.1 → NP_001327217.1  LUC7 related protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRM4

    2. NM_111205.4 → NP_566203.2  LUC7 related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566203.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG98, A0A384LKH8, F4IZU3
      Conserved Domains (1) summary
      cl27291
      Location:2 → 326
      LUC7; LUC7 N_terminus

    3. NM_001337466.1 → NP_001327218.1  LUC7 related protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRM5, A0A7G2EIU6
    Nucleotide Protein
    Heading Accession and Version

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