U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PMAT1 HXXXD-type acyl-transferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833897, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PMAT1
    Official Full Name
    HXXXD-type acyl-transferase family protein
    Primary source
    TAIR:AT5G39050
    Locus tag
    AT5G39050
    See related
    Araport:AT5G39050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MXF12.60; MXF12_60; phenolic glucoside malonyltransferase 1
    Summary
    Encodes a malonyltransferase that may play a role in phenolic xenobiotic detoxification.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PMAT1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (15634444..15636480)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene transporter associated with antigen processing protein 2 Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The acyltransferase PMAT1 malonylates brassinolide glucoside. Gan S, et al. J Biol Chem, 2021 Jan-Jun. PMID 33600798, Free PMC Article
    2. Malonylation is a key reaction in the metabolism of xenobiotic phenolic glucosides in Arabidopsis and tobacco. Taguchi G, et al. Plant J, 2010 Sep. PMID 20626660
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The acyltransferase PMAT1 malonylates brassinolide glucoside.
      Title: The acyltransferase PMAT1 malonylates brassinolide glucoside.
    2. A knockout mutant of At5g39050 (pmat1) exposed to naphthols accumulated only a few malonylglucosides in the cell, and released larger amounts of simple glucosides into the culture medium.
      Title: Malonylation is a key reaction in the metabolism of xenobiotic phenolic glucosides in Arabidopsis and tobacco.
    Submit: New GeneRIF Correction

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help
    NM_123267.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables O-malonyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    HXXXD-type acyl-transferase family protein
    NP_568561.4
    • HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G39080.1); Has 1994 Blast hits to 1978 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 30; Plants - 1963; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      15634444..15636480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123267.6 → NP_568561.4  HXXXD-type acyl-transferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568561.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q940Z5, Q9FID3
      UniProtKB/TrEMBL
      A0A5S9Y9T7, A0A654G674
      Conserved Domains (1) summary
      pfam02458
      Location:17 → 461
      Transferase; Transferase family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q940Z5.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools