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    WEB1 WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817198, updated on 18-Sep-2024

    Summary

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    Official Symbol
    WEB1
    Official Full Name
    WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827)
    Primary source
    TAIR:AT2G26570
    Locus tag
    AT2G26570
    See related
    Araport:AT2G26570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J22.24; T9J22_24; WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1
    Summary
    Encodes a coiled-coil protein WEB1 (weak chloroplast movement under blue light 1). WEB1, together with another coiled-coil protein WEB2/PMI2 (At1g66840), maintains the chloroplast photorelocation movement velocity.
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    Genomic context

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    See WEB1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (11298914..11302319)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene heme oxygenase 2 Neighboring gene phospholipase A 2A Neighboring gene plant-specific transcription factor YABBY family protein Neighboring gene regulatory particle non-ATPase 13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Two interacting coiled-coil proteins, WEB1 and PMI2, maintain the chloroplast photorelocation movement velocity in Arabidopsis. Kodama Y, et al. Proc Natl Acad Sci U S A, 2010 Nov 9. PMID 20974974, Free PMC Article
    2. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A cytosolic WEB1-PMI2 complex maintains the velocity of chloroplast photorelocation movement via cp-actin filament regulation. [WEB1]
      Title: Two interacting coiled-coil proteins, WEB1 and PMI2, maintain the chloroplast photorelocation movement velocity in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001336076.1
    NM_128214.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within chloroplast accumulation movement IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within chloroplast avoidance movement IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in peroxisome HDA PubMed 

    General protein information

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    Preferred Names
    WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827)
    NP_180225.1
    • Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT4G33390.1); Has 151476 Blast hits to 77886 proteins in 3477 species: Archae - 2093; Bacteria - 37732; Metazoa - 61062; Fungi - 12741; Plants - 9509; Viruses - 541; Other Eukaryotes - 27798 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11298914..11302319
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128214.3 → NP_180225.1  WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180225.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48724, Q0WQC5
      UniProtKB/TrEMBL
      A0A178VMR8, A0A7G2E969
      Conserved Domains (1) summary
      pfam05701
      Location:162 → 728
      WEMBL; Weak chloroplast movement under blue light

    2. NM_001336076.1 → NP_001325286.1  WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48724, Q0WQC5
      UniProtKB/TrEMBL
      A0A178VMR8, A0A7G2E969
      Conserved Domains (1) summary
      pfam05701
      Location:162 → 728
      WEMBL; Weak chloroplast movement under blue light
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O48724.1

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