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    Slc26a10 solute carrier family 26, member 10 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 366909, updated on 9-Dec-2024

    Summary

    Official Symbol
    Slc26a10provided by RGD
    Official Full Name
    solute carrier family 26, member 10provided by RGD
    Primary source
    RGD:1564851
    See related
    EnsemblRapid:ENSRNOG00000029465 AllianceGenome:RGD:1564851
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1564851
    Summary
    Predicted to enable inorganic anion transmembrane transporter activity and organic anion transmembrane transporter activity. Predicted to be involved in chloride transmembrane transport and sulfate transmembrane transport. Predicted to be active in plasma membrane. Orthologous to human SLC26A10P (solute carrier family 26 member 10, pseudogene). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 123.8), Thymus (RPKM 45.5) and 9 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Slc26a10 in Genome Data Viewer
    Location:
    7q22
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (64880694..64890340, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (62995165..63005099, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (70458528..70469212, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q4, pseudogene 1 Neighboring gene ribosomal protein S26 like 1 Neighboring gene beta-1,4-N-acetyl-galactosaminyl transferase 1 Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene uncharacterized LOC134479708 Neighboring gene deltex E3 ubiquitin ligase 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables bicarbonate transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables chloride transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables oxalate transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sulfate transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in bicarbonate transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chloride transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in oxalate transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sulfate transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    solute carrier family 26 member 10

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134595.3NP_001128067.2  solute carrier family 26 member 10

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/TrEMBL
      A6HQT1, D3ZXL0
      Related
      ENSRNOP00000049501.5, ENSRNOT00000052288.7
      Conserved Domains (2) summary
      cd07042
      Location:553661
      STAS_SulP_like_sulfate_transporter; Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
      TIGR00815
      Location:91664
      sulP; high affinity sulphate transporter 1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      64880694..64890340 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063264052.1XP_063120122.1  solute carrier family 26 member 10 isoform X2

    2. XM_063264053.1XP_063120123.1  solute carrier family 26 member 10 isoform X3

    3. XM_063264051.1XP_063120121.1  solute carrier family 26 member 10 isoform X1

      UniProtKB/TrEMBL
      A6HQT1
    4. XM_063264050.1XP_063120120.1  solute carrier family 26 member 10 isoform X1

      UniProtKB/TrEMBL
      A6HQT1
    5. XM_039079687.2XP_038935615.1  solute carrier family 26 member 10 isoform X4

      Conserved Domains (1) summary
      pfam00916
      Location:105433
      Sulfate_transp; Sulfate permease family