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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001109137.2 → NP_001102607.1 tubby-related protein 4
See identical proteins and their annotated locations for NP_001102607.1
Status: VALIDATED
- Source sequence(s)
-
JAXUCZ010000001
- UniProtKB/TrEMBL
- A6KP05, D3ZFM2
- Related
- ENSRNOP00000024412.3, ENSRNOT00000024412.7
- Conserved Domains (5) summary
-
- COG2319
Location:67 → 217
- WD40; WD40 repeat [General function prediction only]
- pfam01167
Location:1469 → 1539
- Tub; Tub family
- sd00039
Location:85 → 123
- 7WD40; WD40 repeat [structural motif]
- cl02533
Location:373 → 408
- SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
- cl02567
Location:78 → 218
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086019.1 Reference GRCr8
- Range
-
49082492..49218262
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_063270684.1 → XP_063126754.1 tubby-related protein 4 isoform X1
- UniProtKB/TrEMBL
- A6KP05, D3ZFM2
-
XM_008758737.4 → XP_008756959.1 tubby-related protein 4 isoform X1
See identical proteins and their annotated locations for XP_008756959.1
- UniProtKB/TrEMBL
- A6KP05, D3ZFM2
- Conserved Domains (5) summary
-
- COG2319
Location:67 → 217
- WD40; WD40 repeat [General function prediction only]
- pfam01167
Location:1469 → 1539
- Tub; Tub family
- sd00039
Location:85 → 123
- 7WD40; WD40 repeat [structural motif]
- cl02533
Location:373 → 408
- SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
- cl02567
Location:78 → 218
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_006227887.5 → XP_006227949.1 tubby-related protein 4 isoform X1
See identical proteins and their annotated locations for XP_006227949.1
- UniProtKB/TrEMBL
- A6KP05, D3ZFM2
- Conserved Domains (5) summary
-
- COG2319
Location:67 → 217
- WD40; WD40 repeat [General function prediction only]
- pfam01167
Location:1469 → 1539
- Tub; Tub family
- sd00039
Location:85 → 123
- 7WD40; WD40 repeat [structural motif]
- cl02533
Location:373 → 408
- SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
- cl02567
Location:78 → 218
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...