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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012330.1 RefSeqGene
- Range
-
4994..42858
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001130172.2 → NP_001123644.1 transcriptional activator Myb isoform 3
See identical proteins and their annotated locations for NP_001123644.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3, also known as 8) uses an alternate in-frame splice site and lacks an in-frame exon compared to variant 1. The resulting isoform (3) is shorter than isoform 1.
- Source sequence(s)
-
AJ606320, AL023693, D25774
- Consensus CDS
-
CCDS47482.1
- UniProtKB/TrEMBL
-
Q708J0
- Related
- ENSP00000410825.2, ENST00000442647.7
- Conserved Domains (4) summary
-
- smart00717
Location:92 → 140
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam00249
Location:92 → 138
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam07988
Location:269 → 313
- LMSTEN; LMSTEN motif
- pfam09316
Location:398 → 559
- Cmyb_C; C-myb, C-terminal
-
NM_001130173.2 → NP_001123645.1 transcriptional activator Myb isoform 1
See identical proteins and their annotated locations for NP_001123645.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1, also known as 9Aii) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AJ606319, AL023693, D25774
- Consensus CDS
-
CCDS47481.1
- UniProtKB/TrEMBL
-
Q708J0
- Related
- ENSP00000339992.5, ENST00000341911.10
- Conserved Domains (4) summary
-
- smart00717
Location:92 → 140
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam00249
Location:92 → 138
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam07988
Location:269 → 313
- LMSTEN; LMSTEN motif
- pfam09316
Location:518 → 683
- Cmyb_C; C-myb, C-terminal
-
NM_001161656.2 → NP_001155128.1 transcriptional activator Myb isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4, also known as E8SE9B) uses an alternate in-frame splice site compared to variant 1. The resulting isoform (4) is shorter than isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55058.1
- UniProtKB/TrEMBL
-
Q708J0
- Related
- ENSP00000434723.1, ENST00000528774.5
- Conserved Domains (4) summary
-
- smart00717
Location:92 → 140
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam00249
Location:92 → 138
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam07988
Location:269 → 313
- LMSTEN; LMSTEN motif
- pfam09316
Location:515 → 680
- Cmyb_C; C-myb, C-terminal
-
NM_001161657.2 → NP_001155129.1 transcriptional activator Myb isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5, also known as DelE9) lacks two alternate in-frame exons compared to variant 1. The resulting isoform (5) is shorter than isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55061.1
- UniProtKB/TrEMBL
-
Q708J0
- Related
- ENSP00000435938.1, ENST00000525369.5
- Conserved Domains (4) summary
-
- smart00717
Location:92 → 140
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam00249
Location:92 → 138
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam07988
Location:269 → 313
- LMSTEN; LMSTEN motif
- pfam09316
Location:317 → 477
- Cmyb_C; C-myb, C-terminal
-
NM_001161658.2 → NP_001155130.1 transcriptional activator Myb isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6, also known as E9S-48E9B) uses an alternate in-frame splice site compared to variant 1. The resulting isoform (6) is shorter than isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55059.1
- UniProtKB/TrEMBL
-
Q708J0
- Related
- ENSP00000432851.1, ENST00000534121.5
- Conserved Domains (4) summary
-
- smart00717
Location:92 → 140
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam00249
Location:92 → 138
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam07988
Location:269 → 313
- LMSTEN; LMSTEN motif
- pfam09316
Location:502 → 667
- Cmyb_C; C-myb, C-terminal
-
NM_001161659.2 → NP_001155131.1 transcriptional activator Myb isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (7, also known as DelE13) lacks two alternate in-frame exons compared to variant 1. The resulting isoform (7) is shorter than isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55060.1
- UniProtKB/TrEMBL
-
Q708J0
- Related
- ENSP00000435055.1, ENST00000534044.5
- Conserved Domains (4) summary
-
- smart00717
Location:92 → 140
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam00249
Location:92 → 138
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam07988
Location:269 → 313
- LMSTEN; LMSTEN motif
- pfam09316
Location:401 → 530
- Cmyb_C; C-myb, C-terminal
-
NM_001161660.2 → NP_001155132.1 transcriptional activator Myb isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (8, also known as DelE8) lacks two alternate in-frame exons compared to variant 1. The resulting isoform (8) is shorter than isoform 1.
- Source sequence(s)
-
AL023693
- Consensus CDS
-
CCDS55062.1
- UniProtKB/TrEMBL
-
Q708J0
- Related
- ENSP00000436605.1, ENST00000533624.5
- Conserved Domains (3) summary
-
- smart00717
Location:92 → 140
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- pfam00249
Location:92 → 138
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam09316
Location:366 → 527
- Cmyb_C; C-myb, C-terminal
-
NM_005375.4 → NP_005366.2 transcriptional activator Myb isoform 2
See identical proteins and their annotated locations for NP_005366.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2, also known as M15024) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AL023693, BC064955, D25774, X52125
- Consensus CDS
-
CCDS5174.1
- UniProtKB/Swiss-Prot
- E9PI07, E9PLZ5, E9PNA4, E9PNL6, E9PRS2, P10242, P78391, P78392, P78525, P78526, Q14023, Q14024, Q708E4, Q708E7, Q9UE83
- UniProtKB/TrEMBL
- Q708E9, Q708J0
- Related
- ENSP00000356788.4, ENST00000367814.8
- Conserved Domains (4) summary
-
- pfam00249
Location:40 → 86
- Myb_DNA-binding; Myb-like DNA-binding domain
- pfam07988
Location:269 → 313
- LMSTEN; LMSTEN motif
- pfam09316
Location:401 → 563
- Cmyb_C; C-myb, C-terminal
- cl28544
Location:89 → 202
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
RNA
-
NR_134958.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (9, also known as E8A) contains an alternate exon and lacks an exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ606317, AL023693, D25774
- Related
-
ENST00000525477.5
-
NR_134959.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (10, also known as E8SE8A) uses an alternate splice site, lacks an exon, and contains an alternate exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ606321, AL023693, D25774
- Related
-
ENST00000463282.6
-
NR_134960.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (11, also known as E10A) lacks an exon and contains an alternate exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ606322, AL023693, D25774
- Related
-
ENST00000339290.9
-
NR_134961.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (12, also known as E9A or 9Ai) lacks an exon and contains an alternate exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ606318, AL023693, D25774
- Related
-
ENST00000533837.5
-
NR_134962.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (13, also known as DelE5E8A) lacks two exons and contains an alternate exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ606317, AJ606318, AL023693, AY787446, D25774, X52125
-
NR_134963.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (14, also known as E12L-1) lacks an exon and uses an alternate splice site compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ606317, AL023693, AY787451, D25774, X52125
- Related
-
ENST00000616088.4
-
NR_134964.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (15, also known as E8SE10A) uses an alternate splice site, lacks an exon, and contains an alternate exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ606317, AL023693, AY787458, D25774
- Related
-
ENST00000526889.5
-
NR_134965.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (16, also known as E8AE10A) lacks an exon and contains two alternate exons compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AJ606317, AL023693, AY787456, D25774
- Related
-
ENST00000525514.5