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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163685.1 → NP_001157157.1  pregnancy specific glycoprotein 18 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an in-frame internal exon and the 3' exon, but has an alternate 3' sequence, as compared to variant 1. The resulting isoform (2) lacks an internal segment and has a different and much shorter C-terminus, as compared to isoform 1.
- Source sequence(s)
-
AK167661, BQ031876, CN704107
- Consensus CDS
-
CCDS52050.1
- UniProtKB/TrEMBL
- E9Q8L0, Q3TIY4
- Related
- ENSMUSP00000096380.4, ENSMUST00000098783.5
- Conserved Domains (2) summary
-
- cd05774
Location:156 → 258
- Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)
- smart00410
Location:160 → 258
- IG_like; Immunoglobulin like
-
NM_011963.2 → NP_036093.2  pregnancy specific glycoprotein 18 isoform 1
See identical proteins and their annotated locations for NP_036093.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
BC138857, BY713630
- Consensus CDS
-
CCDS20869.1
- UniProtKB/TrEMBL
- B2RSG7, Q9R038
- Related
- ENSMUSP00000003597.8, ENSMUST00000003597.15
- Conserved Domains (3) summary
-
- cd05774
Location:277 → 379
- Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)
- smart00408
Location:401 → 462
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:396 → 473
- IG_like; Immunoglobulin like
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000073.7Â Reference GRCm39 C57BL/6J
- Range
-
18079669..18088963 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006540003.4 → XP_006540066.1  pregnancy specific glycoprotein 18 isoform X1
- UniProtKB/TrEMBL
-
Q9R038
- Conserved Domains (3) summary
-
- smart00408
Location:329 → 390
- IGc2; Immunoglobulin C-2 Type
- cd05774
Location:157 → 261
- Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)
- cl11960
Location:277 → 310
- Ig; Immunoglobulin domain
-
XM_006540006.4 → XP_006540069.1  pregnancy specific glycoprotein 18 isoform X2
- Conserved Domains (2) summary
-
- smart00408
Location:280 → 341
- IGc2; Immunoglobulin C-2 Type
- cd05774
Location:156 → 260
- Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)