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    CAM6 calmodulin 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832245, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CAM6
    Official Full Name
    calmodulin 6
    Primary source
    TAIR:AT5G21274
    Locus tag
    AT5G21274
    See related
    Araport:AT5G21274
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ACAM-6; calmodulin 6
    Summary
    Encodes a calmodulin isoform. Expressed in leaves.
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    Genomic context

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    See CAM6 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (7214474..7216052, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene 5'-AMP-activated protein kinase beta-2 subunit protein Neighboring gene protein kinase family protein Neighboring gene Ca2+regulated serine-threonine protein kinase family protein Neighboring gene tRNA-Asp

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Calmodulin isoforms in Arabidopsis encoded by multiple divergent mRNAs. Gawienowski MC, et al. Plant Mol Biol, 1993 May. PMID 8507825
    2. An IQ domain mediates the interaction with calmodulin in a plant cyclic nucleotide-gated channel. Fischer C, et al. Plant Cell Physiol, 2013 Apr. PMID 23385145, Free PMC Article
    3. Interaction of a kinesin-like protein with calmodulin isoforms from Arabidopsis. Reddy VS, et al. J Biol Chem, 1999 Oct 29. PMID 10531384
    4. A novel family of Ca2+/calmodulin-binding proteins involved in transcriptional regulation: interaction with fsh/Ring3 class transcription activators. Du L, et al. Plant Mol Biol, 2004 Mar. PMID 15316289
    5. The N-coil and the globular N-terminal domain of plant ARGONAUTE1 are interaction hubs for regulatory factors. Bressendorff S, et al. Biochem J, 2023 Jul 12. PMID 37278687

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_180529.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within calcium-mediated signaling TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in intracellular anatomical structure TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    calmodulin 6
    NP_850860.1
    • calmodulin 6 (CAM6); FUNCTIONS IN: calcium ion binding; INVOLVED IN: calcium-mediated signaling; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 34463 Blast hits to 23268 proteins in 1758 species: Archae - 4; Bacteria - 213; Metazoa - 14512; Fungi - 7798; Plants - 6959; Viruses - 0; Other Eukaryotes - 4977 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7214474..7216052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180529.4 → NP_850860.1  calmodulin 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850860.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q03509
      UniProtKB/TrEMBL
      A0A178UHI2, A0A5S9Y6G5, A8Y7S8
      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 149
      PTZ00184; calmodulin; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q03509.2

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