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    RUB3 ubiquitin-related protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837750, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RUB3
    Official Full Name
    ubiquitin-related protein 3
    Primary source
    TAIR:AT1G11980
    Locus tag
    AT1G11980
    See related
    Araport:AT1G11980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12F1.15; F12F1_15; ubiquitin-related protein 3
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    Genomic context

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    See RUB3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (4045619..4045855)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ERD (early-responsive to dehydration stress) family protein Neighboring gene Ubiquitin-like superfamily protein Neighboring gene O-fucosyltransferase family protein Neighboring gene Phosphofructokinase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    ubiquitin-related protein 3
    NP_172662.1
    • ubiquitin-related protein 3 (RUB3); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: related to ubiquitin 1 (TAIR:AT1G31340.1); Has 10783 Blast hits to 5743 proteins in 691 species: Archae - 0; Bacteria - 14; Metazoa - 4770; Fungi - 1304; Plants - 2605; Viruses - 173; Other Eukaryotes - 1917 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4045619..4045855
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101070.1 → NP_172662.1  ubiquitin-related protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172662.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65381
      UniProtKB/TrEMBL
      A0A178WC32, A0A5S9TYV0
      Conserved Domains (1) summary
      cd01806
      Location:3 → 76
      Ubl_NEDD8; ubiquitin-like (Ubl) domain found in neural precursor cell expressed developmentally down-regulated protein 8 (NEDD8) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O65381.1

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