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    NRAMP5 NRAMP metal ion transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827613, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NRAMP5
    Official Full Name
    NRAMP metal ion transporter family protein
    Primary source
    TAIR:AT4G18790
    Locus tag
    AT4G18790
    See related
    Araport:AT4G18790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATNRAMP5; F28A21.200; F28A21_200
    Summary
    member of Nramp2 family
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    Genomic context

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    See NRAMP5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (10317416..10319736, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene myb domain protein 98 Neighboring gene cellulose synthase family protein Neighboring gene ncRNA Neighboring gene RAB GTPase homolog A1D Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic relationships within cation transporter families of Arabidopsis. Mäser P, et al. Plant Physiol, 2001 Aug. PMID 11500563, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_117995.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables inorganic anion transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables metal ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion transmembrane transporter activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within intracellular monoatomic cation homeostasis NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within metal ion transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within monoatomic cation transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    NRAMP metal ion transporter family protein
    NP_193614.1
    • NRAMP5; FUNCTIONS IN: inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular metal ion homeostasis, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: NRAMP metal ion transporter 2 (TAIR:AT1G47240.1); Has 5000 Blast hits to 4958 proteins in 1554 species: Archae - 111; Bacteria - 3609; Metazoa - 367; Fungi - 258; Plants - 341; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10317416..10319736 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117995.2 → NP_193614.1  NRAMP metal ion transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193614.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SN36
      UniProtKB/TrEMBL
      A0A178UT45, A0A654FQQ4
      Conserved Domains (2) summary
      pfam01566
      Location:90 → 453
      Nramp; Natural resistance-associated macrophage protein
      cl00456
      Location:68 → 446
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SN36.1

    Gene LinkOut

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