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    lncRNA:CR33938 long non-coding RNA:CR33938 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3772088, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR33938provided by FlyBase
    Official Full Name
    long non-coding RNA:CR33938provided by FlyBase
    Primary source
    FLYBASE:FBgn0063127
    Locus tag
    Dmel_CR33938
    See related
    AllianceGenome:FB:FBgn0063127
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LP03188; CR33938; Dmel\CR33938; pncr002:3R
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    Genomic context

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    See lncRNA:CR33938 in Genome Data Viewer
    Location:
    84A4-84A4; 3-48 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6699560..6700164, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (2525282..2525886, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ccp84Ad Neighboring gene Ccp84Ac Neighboring gene Ccp84Ab Neighboring gene Ccp84Aa

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Single-Cell Atlas of the Drosophila Leg Disc Identifies a Long Non-Coding RNA in Late Development. Tse J, et al. Int J Mol Sci, 2022 Jun 18. PMID 35743238, Free PMC Article
    2. Opposing intrinsic temporal gradients guide neural stem cell production of varied neuronal fates. Liu Z, et al. Science, 2015 Oct 16. PMID 26472907
    3. Identification of putative noncoding polyadenylated transcripts in Drosophila melanogaster. Tupy JL, et al. Proc Natl Acad Sci U S A, 2005 Apr 12. PMID 15809421, Free PMC Article
    4. Conservation of regulatory sequences and gene expression patterns in the disintegrating Drosophila Hox gene complex. Negre B, et al. Genome Res, 2005 May. PMID 15867430, Free PMC Article
    5. Genome-Wide Identification of Long Noncoding RNA and Their Potential Interactors in ISWI Mutants. Zhang L, et al. Int J Mol Sci, 2022 Jun 2. PMID 35682924, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    • alternate names: putative noncoding RNA 002:3R
    • lncRNA:CR33938-RA; Dmel\lncRNA:CR33938-RA; CR33938-RA; Dmel\CR33938-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      6699560..6700164 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_002492.2 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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