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    CNGC3 cyclic nucleotide gated channel 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819251, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CNGC3
    Official Full Name
    cyclic nucleotide gated channel 3
    Primary source
    TAIR:AT2G46430
    Locus tag
    AT2G46430
    See related
    Araport:AT2G46430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCNGC3; CNGC3.C; cyclic nucleotide gated channel 3; F11C10.12
    Summary
    cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistance
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    Genomic context

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    See CNGC3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Sequence:
    Chromosome: 2; NC_003071.7 (19057999..19061492)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene helicase with zinc finger protein Neighboring gene cyclic nucleotide-gated channels Neighboring gene cyclic nucleotide-gated channel 12 Neighboring gene OxaA/YidC-like membrane insertion protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis thaliana cyclic nucleotide gated channel 3 forms a non-selective ion transporter involved in germination and cation transport. Gobert A, et al. J Exp Bot, 2006. PMID 16449377
    2. Genes encoding calmodulin-binding proteins in the Arabidopsis genome. Reddy VS, et al. J Biol Chem, 2002 Mar 22. PMID 11782485
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. CNGC3 functions in the non-selective uptake of monovalent cations in Arabidopsis root tissue.
      Title: Arabidopsis thaliana cyclic nucleotide gated channel 3 forms a non-selective ion transporter involved in germination and cation transport.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001125065.2
    NM_130207.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cyclic nucleotide gated channel 3
    NP_001118537.1
    • cyclic nucleotide gated channel 3 (CNGC3); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 10 (TAIR:AT1G01340.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_566075.1
    • cyclic nucleotide gated channel 3 (CNGC3); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 10 (TAIR:AT1G01340.2); Has 3204 Blast hits to 3078 proteins in 223 species: Archae - 0; Bacteria - 24; Metazoa - 1501; Fungi - 4; Plants - 972; Viruses - 0; Other Eukaryotes - 703 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19057999..19061492
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001125065.2 → NP_001118537.1  cyclic nucleotide gated channel 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118537.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SKD7, Q9XFS1, Q9ZPK1
      UniProtKB/TrEMBL
      A0A5S9X7Z4, A0A654FD01
      Conserved Domains (2) summary
      cd00038
      Location:477 → 606
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:83 → 406
      Ion_trans; Ion transport protein

    2. NM_130207.4 → NP_566075.1  cyclic nucleotide gated channel 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566075.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SKD7, Q9XFS1, Q9ZPK1
      UniProtKB/TrEMBL
      A0A5S9X7Z4, A0A654FD01
      Conserved Domains (2) summary
      cd00038
      Location:477 → 606
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:83 → 406
      Ion_trans; Ion transport protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SKD7.2

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