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    lncRNA:CR43830 long non-coding RNA:CR43830 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 14462589, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR43830provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43830provided by FlyBase
    Primary source
    FLYBASE:FBgn0264378
    Locus tag
    Dmel_CR43830
    See related
    AllianceGenome:FB:FBgn0264378
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43830; Dmel\CR43830; lincRNA.311
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    Genomic context

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    See lncRNA:CR43830 in Genome Data Viewer
    Location:
    51D7-51D7; 2-73 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (14994559..14995195)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (10882064..10882700)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene parcas Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene hibris Neighboring gene Odorant-binding protein 51a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43830-RA; Dmel\lncRNA:CR43830-RA; CR43830-RA; Dmel\CR43830-RA
    • lncRNA:CR43830-RB; Dmel\lncRNA:CR43830-RB; CR43830-RB; Dmel\CR43830-RB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      14994559..14995195
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_073877.2 RNA Sequence

      Status: REVIEWED

    2. NR_124553.1 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.