U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Thioredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826382, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Thioredoxin superfamily protein
    Primary source
    TAIR:AT4G08280
    Locus tag
    AT4G08280
    See related
    Araport:AT4G08280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T12G13.120; T12G13_120
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (5230245..5232196)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase T3-like protein Neighboring gene pseudo Neighboring gene nodulin MtN21 /EamA-like transporter family protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    NM_116897.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Thioredoxin superfamily protein
    NP_567336.1
    • Thioredoxin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin like (InterPro:IPR008554), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      5230245..5232196
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340579.1 → NP_001329893.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178US52, A0A7G2F1Y6, Q9SUF2
      Conserved Domains (1) summary
      pfam05768
      Location:43 → 130
      DUF836; Glutaredoxin-like domain (DUF836)

    2. NM_001340580.1 → NP_001329894.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178US52, A0A7G2F1Y6, Q9SUF2
      Conserved Domains (1) summary
      pfam05768
      Location:43 → 130
      DUF836; Glutaredoxin-like domain (DUF836)

    3. NM_116897.3 → NP_567336.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567336.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178US52, Q93WH0
      Conserved Domains (1) summary
      pfam05768
      Location:35 → 122
      DUF836; Glutaredoxin-like domain (DUF836)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.