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    bZIP23 Basic-leucine zipper (bZIP) transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816178, updated on 18-Sep-2024

    Summary

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    Official Symbol
    bZIP23
    Official Full Name
    Basic-leucine zipper (bZIP) transcription factor family protein
    Primary source
    TAIR:AT2G16770
    Locus tag
    AT2G16770
    See related
    Araport:AT2G16770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T24I21.18; T24I21_18
    Summary
    Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.
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    Genomic context

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    See bZIP23 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (7279366..7281499)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene kinase with adenine nucleotide alpha hydrolases-like domain-containing protein Neighboring gene Calcium-dependent phosphotriesterase superfamily protein Neighboring gene Transducin family protein / WD-40 repeat family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene high-affinity nickel-transport family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reduced expression of bZIP19 and bZIP23 increases zinc and cadmium accumulation in Arabidopsis halleri. Spielmann J, et al. Plant Cell Environ, 2024 Jun. PMID 38404193
    2. Model of how plants sense zinc deficiency. Assunção AG, et al. Metallomics, 2013 Sep. PMID 23851954
    3. Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency. Assunção AG, et al. Proc Natl Acad Sci U S A, 2010 Jun 1. PMID 20479230, Free PMC Article
    4. Identification of putative target genes of bZIP19, a transcription factor essential for Arabidopsis adaptation to Zn deficiency in roots. Inaba S, et al. Plant J, 2015 Oct. PMID 26306426
    5. Unequally redundant RCD1 and SRO1 mediate stress and developmental responses and interact with transcription factors. Jaspers P, et al. Plant J, 2009 Oct. PMID 19548978

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Reduced expression of bZIP19 and bZIP23 increases zinc and cadmium accumulation in Arabidopsis halleri.
      Title: Reduced expression of bZIP19 and bZIP23 increases zinc and cadmium accumulation in Arabidopsis halleri.
    2. Studies indicate that zinc deficiency leads to the activation of bZIP9 and bZIP23.
      Title: Model of how plants sense zinc deficiency.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001335489.1
    NM_127229.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cellular response to zinc ion IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to zinc ion IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Basic-leucine zipper (bZIP) transcription factor family protein
    NP_179268.2
    • bZIP23; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35040.1); Has 113 Blast hits to 112 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 14; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7279366..7281499
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127229.3 → NP_179268.2  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179268.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GTS2, Q9SLE1
      UniProtKB/TrEMBL
      A0A178VYS8, A0A5S9WYH7, A0A654ETF5
      Conserved Domains (2) summary
      smart00338
      Location:78 → 137
      BRLZ; basic region leucin zipper
      cd14686
      Location:78 → 130
      bZIP; coiled coil [structural motif]

    2. NM_001335489.1 → NP_001324107.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GTS2, Q9SLE1
      UniProtKB/TrEMBL
      A0A178VYS8, A0A5S9WYH7, A0A654ETF5
      Conserved Domains (2) summary
      smart00338
      Location:78 → 137
      BRLZ; basic region leucin zipper
      cd14686
      Location:78 → 130
      bZIP; coiled coil [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GTS2.1

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