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    DL1D DYNAMIN-like 1D [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819067, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DL1D
    Official Full Name
    DYNAMIN-like 1D
    Primary source
    TAIR:AT2G44590
    Locus tag
    AT2G44590
    See related
    Araport:AT2G44590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ADL1D; DYNAMIN-like 1D; F16B22.8
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    Genomic context

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    See DL1D in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Sequence:
    Chromosome: 2; NC_003071.7 (18403682..18407103, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene zinc ion binding protein Neighboring gene uncharacterized protein Neighboring gene Ras-related small GTP-binding family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_180087.1
    NM_180088.3
    NM_180089.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DYNAMIN-like 1D
    NP_850418.1
    • DYNAMIN-like 1D (DL1D); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1); Has 2767 Blast hits to 2641 proteins in 298 species: Archae - 0; Bacteria - 8; Metazoa - 1053; Fungi - 825; Plants - 570; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
    NP_850419.1
    • DYNAMIN-like 1D; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1); Has 2761 Blast hits to 2635 proteins in 296 species: Archae - 0; Bacteria - 4; Metazoa - 1053; Fungi - 825; Plants - 568; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
    NP_850420.1
    • DYNAMIN-like 1D (DL1D); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1E (TAIR:AT3G60190.1); Has 2860 Blast hits to 2735 proteins in 316 species: Archae - 2; Bacteria - 41; Metazoa - 1056; Fungi - 842; Plants - 574; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18403682..18407103 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180088.3 → NP_850419.1  DYNAMIN-like 1D [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850419.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F392
      Conserved Domains (4) summary
      smart00302
      Location:498 → 590
      GED; Dynamin GTPase effector domain
      cd08771
      Location:35 → 284
      DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
      COG0699
      Location:89 → 512
      CrfC; Replication fork clamp-binding protein CrfC (dynamin-like GTPase family) [Replication, recombination and repair]
      pfam01031
      Location:207 → 479
      Dynamin_M; Dynamin central region

    2. NM_180089.2 → NP_850420.1  DYNAMIN-like 1D [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850420.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80499, Q8S3C9, Q9FNX3, Q9FNX4
      UniProtKB/TrEMBL
      A0A654F392, B5X4Z5
      Conserved Domains (4) summary
      smart00302
      Location:515 → 607
      GED; Dynamin GTPase effector domain
      cd08771
      Location:35 → 301
      DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
      COG0699
      Location:89 → 529
      CrfC; Replication fork clamp-binding protein CrfC (dynamin-like GTPase family) [Replication, recombination and repair]
      pfam01031
      Location:224 → 496
      Dynamin_M; Dynamin central region

    3. NM_180087.1 → NP_850418.1  DYNAMIN-like 1D [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850418.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F392
      Conserved Domains (4) summary
      smart00302
      Location:498 → 591
      GED; Dynamin GTPase effector domain
      cd08771
      Location:35 → 284
      DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
      COG0699
      Location:89 → 574
      CrfC; Replication fork clamp-binding protein CrfC (dynamin-like GTPase family) [Replication, recombination and repair]
      pfam01031
      Location:207 → 479
      Dynamin_M; Dynamin central region
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8S3C9.2

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