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    ATCSLA15 Nucleotide-diphospho-sugar transferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826972, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATCSLA15
    Official Full Name
    Nucleotide-diphospho-sugar transferases superfamily protein
    Primary source
    TAIR:AT4G13410
    Locus tag
    AT4G13410
    See related
    Araport:AT4G13410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CELLULOSE SYNTHASE LIKE A15; CSLA15; T9E8.150; T9E8_150
    Summary
    encodes a gene similar to cellulose synthase
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    Genomic context

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    See ATCSLA15 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (7792016..7796041, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ROTUNDIFOLIA like 12 Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene high affinity K+ transporter 5 Neighboring gene isopropyl malate isomerase large subunit 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NM_001340860.1
    NM_001340861.1
    NM_117415.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulose synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glucomannan 4-beta-mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Nucleotide-diphospho-sugar transferases superfamily protein
    NP_193077.2
    • ATCSLA15; FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A10 (TAIR:AT1G24070.1); Has 4859 Blast hits to 4857 proteins in 1398 species: Archae - 204; Bacteria - 3805; Metazoa - 9; Fungi - 83; Plants - 478; Viruses - 11; Other Eukaryotes - 269 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      7792016..7796041 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117415.3 → NP_193077.2  Nucleotide-diphospho-sugar transferases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193077.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9T0L2
      UniProtKB/TrEMBL
      A0A5S9XS73, W8PV68
      Conserved Domains (1) summary
      cd06437
      Location:111 → 347
      CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

    2. NM_001340860.1 → NP_001329703.1  Nucleotide-diphospho-sugar transferases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8I7

    3. NM_001340861.1 → NP_001329704.1  Nucleotide-diphospho-sugar transferases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V620, A0A1P8B8J6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9T0L2.2

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