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    ATOEP16-4 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825463, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATOEP16-4
    Official Full Name
    Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
    Primary source
    TAIR:AT3G62880
    Locus tag
    AT3G62880
    See related
    Araport:AT3G62880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.
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    Genomic context

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    See ATOEP16-4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (23244614..23246066, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene CW-type Zinc Finger

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The outer plastid envelope protein Oep16: role as precursor translocase in import of protochlorophyllide oxidoreductase A. Reinbothe S, et al. Proc Natl Acad Sci U S A, 2004 Feb 17. PMID 14769929, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    • At3g62890_Arabidopsis_lyrata_ssp._lyrata_CAN1 (e-PCR)
    • At3g62890_Arabidopsis_lyrata_ssp._petraea_GER1 (e-PCR)

    Homology

    NM_001340181.1
    NM_116153.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein homodimerization activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein insertion into mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of TIM22 mitochondrial import inner membrane insertion complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid outer membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
    NP_001319822.1
    • ATOEP16-4; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plastid outer membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_191847.1
    • ATOEP16-4; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plastid outer membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 198 Blast hits to 198 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      23244614..23246066 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116153.5 → NP_191847.1  Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191847.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LZH8
      UniProtKB/TrEMBL
      A0A178VCJ7, A0A5S9XN98
      Conserved Domains (1) summary
      pfam02466
      Location:11 → 90
      Tim17; Tim17/Tim22/Tim23/Pmp24 family

    2. NM_001340181.1 → NP_001319822.1  Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2H1ZEK9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LZH8.1

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