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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835403, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT5G53220
    Locus tag
    AT5G53220
    See related
    Araport:AT5G53220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K19E1.2; K19E1_2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (21595990..21598316)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene hypothetical protein (DUF295) Neighboring gene hypothetical protein (DUF295)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036989.2
    NM_001125952.2
    NM_001345045.1
    NM_001345046.1
    NM_001345047.1
    NM_001345048.1
    NM_124701.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001032066.1
    • unknown protein; Has 3081 Blast hits to 2526 proteins in 331 species: Archae - 2; Bacteria - 227; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink).
    NP_001119424.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_200134.2
    • unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21595990..21598316
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036989.2 → NP_001032066.1  uncharacterized protein AT5G53220 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032066.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGS2, A0A384LCQ6, Q5BPG9, Q5XUZ8

    2. NM_001345045.1 → NP_001331625.1  uncharacterized protein AT5G53220 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGS2, A0A384LCQ6, Q5BPG9, Q5XUZ8

    3. NM_001345047.1 → NP_001331627.1  uncharacterized protein AT5G53220 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGS2, A0A384LCQ6, Q5BPG9, Q5XUZ8

    4. NM_001125952.2 → NP_001119424.1  uncharacterized protein AT5G53220 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119424.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGS2, A0A384LCQ6, Q5BPG9, Q5XUZ8

    5. NM_124701.3 → NP_200134.2  uncharacterized protein AT5G53220 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200134.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGS2, A0A384LCQ6, Q5BPG9, Q5XUZ8

    6. NM_001345046.1 → NP_001331626.1  uncharacterized protein AT5G53220 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGS2, A0A384LCQ6, Q5BPG9, Q5XUZ8

    7. NM_001345048.1 → NP_001331628.1  uncharacterized protein AT5G53220 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGS2, A0A384LCQ6, Q5BPG9, Q5XUZ8
    Nucleotide Protein
    Heading Accession and Version

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