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    serine/threonine-protein phosphatase 4 regulatory subunit-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831570, updated on 18-Sep-2024

    Summary

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    Official Full Name
    serine/threonine-protein phosphatase 4 regulatory subunit-like protein
    Primary source
    TAIR:AT5G17070
    Locus tag
    AT5G17070
    See related
    Araport:AT5G17070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2K13.220; F2K13_220
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (5613307..5616233, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene UDP-glucosyl transferase 78D2 Neighboring gene ADP-ribosylation factor B1B Neighboring gene Cysteine proteinases superfamily protein Neighboring gene Cystatin/monellin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PLATINUM SENSITIVE 2 LIKE impacts growth, root morphology, seed set, and stress responses. Kataya ARA, et al. PLoS One, 2017. PMID 28678890, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343480.1
    NM_121713.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein phosphatase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine/threonine-protein phosphatase 4 regulatory subunit-like protein
    NP_197209.2
    • CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5613307..5616233 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121713.3 → NP_197209.2  serine/threonine-protein phosphatase 4 regulatory subunit-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197209.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U812, Q8VY58
      Conserved Domains (1) summary
      pfam09184
      Location:69 → 236
      PPP4R2; PPP4R2

    2. NM_001343480.1 → NP_001330196.1  serine/threonine-protein phosphatase 4 regulatory subunit-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BA22, A0A654G265
    Nucleotide Protein
    Heading Accession and Version

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