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    eukaryotic translation initiation factor 2 family protein / eIF-2 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817316, updated on 18-Sep-2024

    Summary

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    Official Full Name
    eukaryotic translation initiation factor 2 family protein / eIF-2 family protein
    Primary source
    TAIR:AT2G27700
    Locus tag
    AT2G27700
    See related
    Araport:AT2G27700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15K20.20; F15K20_20
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    8
    Sequence:
    Chromosome: 2; NC_003071.7 (11813949..11816002, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 94, subfamily C, polypeptide 1 Neighboring gene miscRNA Neighboring gene 60S acidic ribosomal protein family Neighboring gene 60S acidic ribosomal protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 2 family protein / eIF-2 family protein
    NP_001118399.1
    • eukaryotic translation initiation factor 2 family protein / eIF-2 family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_180338.1
    • eukaryotic translation initiation factor 2 family protein / eIF-2 family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76810.1); Has 37855 Blast hits to 37850 proteins in 3461 species: Archae - 582; Bacteria - 27356; Metazoa - 762; Fungi - 739; Plants - 548; Viruses - 1; Other Eukaryotes - 7867 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11813949..11816002 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128329.1 → NP_180338.1  eukaryotic translation initiation factor 2 family protein / eIF-2 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180338.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0MEQ3, Q9ZUX2
      Conserved Domains (4) summary
      cd01887
      Location:37 → 246
      IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
      pfam00009
      Location:35 → 235
      GTP_EFTU; Elongation factor Tu GTP binding domain
      pfam11987
      Location:372 → 474
      IF-2; Translation-initiation factor 2
      cd03703
      Location:258 → 368
      aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5

    2. NM_001124927.1 → NP_001118399.1  eukaryotic translation initiation factor 2 family protein / eIF-2 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118399.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0MEQ3, F4IGQ9
      Conserved Domains (4) summary
      cd01887
      Location:37 → 246
      IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
      pfam00009
      Location:35 → 235
      GTP_EFTU; Elongation factor Tu GTP binding domain
      pfam11987
      Location:373 → 475
      IF-2; Translation-initiation factor 2
      cd03703
      Location:261 → 369
      aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
    Nucleotide Protein
    Heading Accession and Version

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