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    ASHR2 ASH1-related protein 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816483, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ASHR2
    Official Full Name
    ASH1-related protein 2
    Primary source
    TAIR:AT2G19640
    Locus tag
    AT2G19640
    See related
    Araport:AT2G19640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ASH1-related 2; ASH1-related protein 2; F3P11.24; F3P11_24; SDG39; SET DOMAIN PROTEIN 39
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    Genomic context

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    See ASHR2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (8491192..8492920)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene N-MYC downregulated-like 3 Neighboring gene ncRNA Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_127522.2
    NM_179660.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ASH1-related protein 2
    NP_565457.1
    • ASH1-related protein 2 (ASHR2); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain protein 38 (TAIR:AT5G06620.1); Has 1728 Blast hits to 1706 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 745; Fungi - 362; Plants - 323; Viruses - 3; Other Eukaryotes - 295 (source: NCBI BLink).
    NP_849991.1
    • ASH1-related protein 2 (ASHR2); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain protein 38 (TAIR:AT5G06620.1); Has 1755 Blast hits to 1733 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 753; Fungi - 380; Plants - 323; Viruses - 3; Other Eukaryotes - 296 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8491192..8492920
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179660.2 → NP_849991.1  ASH1-related protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849991.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84WB9, Q94CD2, Q9ZUM9
      UniProtKB/TrEMBL
      A0A178VV82
      Conserved Domains (1) summary
      smart00317
      Location:192 → 275
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain

    2. NM_127522.2 → NP_565457.1  ASH1-related protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565457.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VV82, A0A5S9WZC9, A0A654EVT3
      Conserved Domains (1) summary
      smart00317
      Location:192 → 275
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZUM9.3

    Gene LinkOut

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