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    organic solute transporter ostalpha protein (DUF300) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844058, updated on 18-Sep-2024

    Summary

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    Official Full Name
    organic solute transporter ostalpha protein (DUF300)
    Primary source
    TAIR:AT1G77220
    Locus tag
    AT1G77220
    See related
    Araport:AT1G77220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T14N5.8; T14N5_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (29012674..29015846)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene sugar transporter 14 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ncRNA Neighboring gene AMP-dependent synthetase and ligase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Vacuole Integrity Maintained by DUF300 Proteins Is Required for Brassinosteroid Signaling Regulation. Liu Q, et al. Mol Plant, 2018 Apr 2. PMID 29288738
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_106371.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of brassinosteroid mediated signaling pathway IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within vacuole organization IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within vesicle-mediated transport to the plasma membrane IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plant-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    organic solute transporter ostalpha protein (DUF300)
    NP_565152.1
    • Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT4G38360.2); Has 852 Blast hits to 850 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 289; Fungi - 195; Plants - 246; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29012674..29015846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334770.1 → NP_001320456.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AMV5
      Conserved Domains (1) summary
      pfam03619
      Location:43 → 320
      Solute_trans_a; Organic solute transporter Ostalpha

    2. NM_106371.3 → NP_565152.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565152.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80656, Q94CA0
      UniProtKB/TrEMBL
      A0A178WIR5, A0A5S9WV42, A0A654EPQ1
      Conserved Domains (1) summary
      pfam03619
      Location:43 → 320
      Solute_trans_a; Organic solute transporter Ostalpha
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94CA0.1

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