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    hypothetical protein (DUF3527) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839509, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF3527)
    Primary source
    TAIR:AT1G04490
    Locus tag
    AT1G04490
    See related
    Araport:AT1G04490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19P19.4; F19P19_4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (1217690..1220899, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L14p/L23e family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CCT motif family protein Neighboring gene MOS4-associated complex 3A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001083987.1
    NM_001331481.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF3527)
    NP_001077456.1
    • Protein of unknown function (DUF3527); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT2G33360.2); Has 121 Blast hits to 119 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_001318919.1
    • Protein of unknown function (DUF3527); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT2G33360.2); Has 121 Blast hits to 119 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1217690..1220899 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331486.1 → NP_001321668.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKV3, A0A384KB55, P93811, Q67XK9
      Conserved Domains (1) summary
      pfam12043
      Location:93 → 390
      DUF3527; Domain of unknown function (DUF3527)

    2. NM_001331485.1 → NP_001321664.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKV3, A0A384KB55, P93811, Q67XK9
      Conserved Domains (1) summary
      pfam12043
      Location:93 → 390
      DUF3527; Domain of unknown function (DUF3527)

    3. NM_100328.3 → NP_171943.2  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171943.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKV3, A0A384KB55, P93811, Q67XK9
      Conserved Domains (1) summary
      pfam12043
      Location:93 → 390
      DUF3527; Domain of unknown function (DUF3527)

    4. NM_001331484.1 → NP_001321665.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKV3, A0A384KB55, P93811, Q67XK9
      Conserved Domains (1) summary
      pfam12043
      Location:93 → 390
      DUF3527; Domain of unknown function (DUF3527)

    5. NM_001331483.1 → NP_001321666.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARL2, P93811

    6. NM_001331482.1 → NP_001321667.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKV3, A0A384KB55, P93811, Q67XK9
      Conserved Domains (1) summary
      pfam12043
      Location:93 → 390
      DUF3527; Domain of unknown function (DUF3527)

    7. NM_001331487.1 → NP_001321669.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKV3, A0A384KB55, P93811, Q67XK9
      Conserved Domains (1) summary
      pfam12043
      Location:93 → 390
      DUF3527; Domain of unknown function (DUF3527)

    8. NM_001331481.1 → NP_001318919.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKV3, A0A384KB55, P93811, Q67XK9
      Conserved Domains (1) summary
      pfam12043
      Location:93 → 390
      DUF3527; Domain of unknown function (DUF3527)

    9. NM_001083987.1 → NP_001077456.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077456.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKV3, A0A384KB55, P93811, Q67XK9
      Conserved Domains (1) summary
      pfam12043
      Location:93 → 390
      DUF3527; Domain of unknown function (DUF3527)
    Nucleotide Protein
    Heading Accession and Version

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