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    Glyceraldehyde-3-phosphate dehydrogenase-like family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840319, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Glyceraldehyde-3-phosphate dehydrogenase-like family protein
    Primary source
    TAIR:AT1G34200
    Locus tag
    AT1G34200
    See related
    Araport:AT1G34200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23M19.12; F23M19_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (12455653..12457547)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene NAC domain containing protein 16 Neighboring gene NAC domain containing protein 17 Neighboring gene somatic embryogenesis receptor-like kinase 2 Neighboring gene Regulator of Vps4 activity in the MVB pathway protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_103143.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Glyceraldehyde-3-phosphate dehydrogenase-like family protein
    NP_564441.1
    • Glyceraldehyde-3-phosphate dehydrogenase-like family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Oxidoreductase family protein (TAIR:AT4G09670.1); Has 11880 Blast hits to 11879 proteins in 1945 species: Archae - 244; Bacteria - 8550; Metazoa - 214; Fungi - 474; Plants - 94; Viruses - 0; Other Eukaryotes - 2304 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12455653..12457547
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103143.4 → NP_564441.1  Glyceraldehyde-3-phosphate dehydrogenase-like family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564441.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EF93, Q9ASQ9
      Conserved Domains (2) summary
      COG0673
      Location:6 → 342
      MviM; Predicted dehydrogenase [General function prediction only]
      pfam01408
      Location:7 → 127
      GFO_IDH_MocA; Oxidoreductase family, NAD-binding Rossmann fold
    Nucleotide Protein
    Heading Accession and Version

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