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    plant/protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842902, updated on 18-Sep-2024

    Summary

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    Official Full Name
    plant/protein
    Primary source
    TAIR:AT1G65900
    Locus tag
    AT1G65900
    See related
    Araport:AT1G65900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12P19.7; F12P19_7
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (24515758..24518601, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene benzoyloxyglucosinolate 1 Neighboring gene acyl activating enzyme 12 Neighboring gene NAC domain containing protein 28 Neighboring gene Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334225.1
    NM_105262.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    plant/protein
    NP_564864.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to 306 proteins in 119 species: Archae - 19; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24515758..24518601 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105262.4 → NP_564864.1  plant/protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564864.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WB23, A0A654ELC7, Q94A98
      Conserved Domains (2) summary
      COG0614
      Location:172 → 366
      FepB; ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]
      cl00262
      Location:179 → 265
      TroA-like; Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in the ABC transport of ferric siderophores and metal ions such as Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is formed in the interface between ...

    2. NM_001334225.1 → NP_001320413.1  plant/protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AMT8, Q8LDG8
    Nucleotide Protein
    Heading Accession and Version

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