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    glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843495, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
    Primary source
    TAIR:AT1G71690
    Locus tag
    AT1G71690
    See related
    Araport:AT1G71690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14O23.3; F14O23_3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (26947754..26949248)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene AGAMOUS-like 12 Neighboring gene Peroxidase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_105823.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in xylan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
    NP_565020.1
    • Protein of unknown function (DUF579); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 254 Blast hits to 253 proteins in 21 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26947754..26949248
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105823.4 → NP_565020.1  glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565020.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJV1, Q9C9J1, Q9M9H8
      Conserved Domains (1) summary
      cl04661
      Location:67 → 294
      Polysacc_synt_4; Polysaccharide biosynthesis
    Nucleotide Protein
    Heading Accession and Version

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