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    ACS10 ACC synthase 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842598, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ACS10
    Official Full Name
    ACC synthase 10
    Primary source
    TAIR:AT1G62960
    Locus tag
    AT1G62960
    See related
    Araport:AT1G62960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ACC synthase 10; F16P17.11; F16P17_11
    Summary
    Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.
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    Genomic context

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    See ACS10 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (23318187..23320427, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase 5 Neighboring gene ncRNA Neighboring gene leucine-rich repeat transmembrane protein kinase family protein Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AFP is a novel negative regulator of ABA signaling that promotes ABI5 protein degradation. Lopez-Molina L, et al. Genes Dev, 2003 Feb 1. PMID 12569131, Free PMC Article
    2. Biochemical diversity among the 1-amino-cyclopropane-1-carboxylate synthase isozymes encoded by the Arabidopsis gene family. Yamagami T, et al. J Biol Chem, 2003 Dec 5. PMID 12968022
    3. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_104974.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    NOT enables 1-aminocyclopropane-1-carboxylate synthase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables L-aspartate:2-oxoglutarate aminotransferase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables aromatic-amino-acid transaminase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within amino acid metabolic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    ACC synthase 10
    NP_564804.1
    • ACC synthase 10 (ACS10); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 12 (TAIR:AT5G51690.1); Has 24899 Blast hits to 24897 proteins in 2866 species: Archae - 734; Bacteria - 16849; Metazoa - 510; Fungi - 690; Plants - 1280; Viruses - 0; Other Eukaryotes - 4836 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23318187..23320427 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104974.4 → NP_564804.1  ACC synthase 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564804.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LQ10
      UniProtKB/TrEMBL
      A0A178WC75, A0A5S9WT25
      Conserved Domains (1) summary
      PLN02450
      Location:133 → 557
      PLN02450; 1-aminocyclopropane-1-carboxylate synthase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LQ10.1

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