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    ATP-dependent protease La (LON) domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840423, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATP-dependent protease La (LON) domain protein
    Primary source
    TAIR:AT1G35340
    Locus tag
    AT1G35340
    See related
    Araport:AT1G35340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9I1.11; T9I1_11
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (12977668..12979947)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene EXS (ERD1/XPR1/SYG1) family protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Profiling of the Receptor for Activated C Kinase 1a (RACK1a) interaction network in Arabidopsis thaliana. Guo J, et al. Biochem Biophys Res Commun, 2019 Dec 3. PMID 31606202
    2. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001198210.1
    NM_001333150.1
    NM_001333151.1
    NM_001333152.1
    NM_001333153.1
    NM_103231.4
    NM_179417.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ATP-dependent protease La (LON) domain protein
    NP_001185139.1
    • ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111).
    NP_001319150.1
    • ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_174767.2
    • ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); Has 216 Blast hits to 216 proteins in 83 species: Archae - 0; Bacteria - 95; Metazoa - 1; Fungi - 14; Plants - 53; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
    NP_849748.1
    • ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12977668..12979947
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198210.1 → NP_001185139.1  ATP-dependent protease La (LON) domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185139.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2E1B0, F4HYC0
      Conserved Domains (2) summary
      cl19481
      Location:71 → 179
      LON; Found in ATP-dependent protease La (LON)
      pfam02190
      Location:73 → 294
      LON_substr_bdg; ATP-dependent protease La (LON) substrate-binding domain

    2. NM_179417.2 → NP_849748.1  ATP-dependent protease La (LON) domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849748.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5F1, A0A384KBX0, Q6NLZ9

    3. NM_103231.4 → NP_174767.2  ATP-dependent protease La (LON) domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174767.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EGZ9, A0A7G2E1B0, Q682J5
      Conserved Domains (2) summary
      COG0466
      Location:72 → 312
      Lon; ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]
      cl19481
      Location:71 → 184
      LON; Found in ATP-dependent protease La (LON)

    4. NM_001333151.1 → NP_001322555.1  ATP-dependent protease La (LON) domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AUF1
      Conserved Domains (1) summary
      cl19481
      Location:71 → 184
      LON; Found in ATP-dependent protease La (LON)

    5. NM_001333152.1 → NP_001322554.1  ATP-dependent protease La (LON) domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5F1, A0A384KBX0, Q6NLZ9

    6. NM_001333153.1 → NP_001322553.1  ATP-dependent protease La (LON) domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5F1, A0A384KBX0, Q6NLZ9

    7. NM_001333150.1 → NP_001319150.1  ATP-dependent protease La (LON) domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2E1B0, F4HYC2
    Nucleotide Protein
    Heading Accession and Version

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