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    scpl25 serine carboxypeptidase-like 25 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821207, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl25
    Official Full Name
    serine carboxypeptidase-like 25
    Primary source
    TAIR:AT3G02110
    Locus tag
    AT3G02110
    See related
    Araport:AT3G02110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1C9.10; F1C9_10; serine carboxypeptidase-like 25
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    Genomic context

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    See scpl25 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (370668..373805, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S19e family protein Neighboring gene Insulinase (Peptidase family M16) protein Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene ncRNA Neighboring gene hydroxyproline-rich glycoprotein family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_111077.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 25
    NP_186860.1
    • serine carboxypeptidase-like 25 (scpl25); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G30610.1); Has 3637 Blast hits to 3574 proteins in 364 species: Archae - 0; Bacteria - 191; Metazoa - 636; Fungi - 868; Plants - 1530; Viruses - 0; Other Eukaryotes - 412 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      370668..373805 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111077.4 → NP_186860.1  serine carboxypeptidase-like 25 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186860.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L9Y0, Q9SGA9
      UniProtKB/TrEMBL
      A0A178VL08, A0A5S9X8F6, A0A7G2EHG7
      Conserved Domains (1) summary
      pfam00450
      Location:42 → 467
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L9Y0.2

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