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    heme oxygenase-like, multi-helical [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820955, updated on 18-Sep-2024

    Summary

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    Official Full Name
    heme oxygenase-like, multi-helical
    Primary source
    TAIR:AT3G16990
    Locus tag
    AT3G16990
    See related
    Araport:AT3G16990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (5795123..5796893, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene plant self-incompatibility protein S1 family protein Neighboring gene Plant self-incompatibility protein S1 family Neighboring gene RNA polymerases M/15 Kd subunit Neighboring gene ubiquitin-conjugating enzyme 32 Neighboring gene AP2/B3-like transcriptional factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of gene locus At3g16990 from Arabidopsis thaliana. Blommel PG, et al. Proteins, 2004 Oct 1. PMID 15326608
    2. Salvage of the thiamin pyrimidine moiety by plant TenA proteins lacking an active-site cysteine. Zallot R, et al. Biochem J, 2014 Oct 1. PMID 25014715, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_112575.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables thiaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in thiamine diphosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    heme oxygenase-like, multi-helical
    NP_188324.1
    • Haem oxygenase-like, multi-helical; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 259 Blast hits to 259 proteins in 88 species: Archae - 23; Bacteria - 94; Metazoa - 0; Fungi - 34; Plants - 38; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5795123..5796893 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112575.4 → NP_188324.1  heme oxygenase-like, multi-helical [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188324.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBN8, Q9ASY9
      UniProtKB/TrEMBL
      A0A178VLM1, A0A5S9XD24
      Conserved Domains (1) summary
      cd19357
      Location:7 → 216
      TenA_E_At3g16990-like; TenA_E proteins similar to Arabidopsis thaliana At3g16990
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ASY9.3

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