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    PMI2 PLASTID MOVEMENT IMPAIRED protein (DUF827) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843002, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PMI2
    Official Full Name
    PLASTID MOVEMENT IMPAIRED protein (DUF827)
    Primary source
    TAIR:AT1G66840
    Locus tag
    AT1G66840
    See related
    Araport:AT1G66840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4N21.22; F4N21_22; plastid movement impaired 2; WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2; WEB2
    Summary
    Encodes a coiled-coil protein WEB2 (weak chloroplast movement under blue light 2, also named PMI2/plastid movement impaired 2). Involved in chloroplast avoidance movement under intermediate and high light intensities. WEB2, together with another coiled-coil protein WEB1 (AT2G26570), maintains the chloroplast photorelocation movement velocity.
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    Genomic context

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    See PMI2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (24933777..24936512, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein Neighboring gene glycine-rich protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene Carbohydrate-binding X8 domain superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plastid movement impaired 2, a new gene involved in normal blue-light-induced chloroplast movements in Arabidopsis. Luesse DR, et al. Plant Physiol, 2006 Aug. PMID 16778016, Free PMC Article
    2. Two interacting coiled-coil proteins, WEB1 and PMI2, maintain the chloroplast photorelocation movement velocity in Arabidopsis. Kodama Y, et al. Proc Natl Acad Sci U S A, 2010 Nov 9. PMID 20974974, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Plastid Movement Impaired 2, PMI2 is associated with the movement of chloroplasts under high-light conditions. [PMI2]
      Title: Plastid movement impaired 2, a new gene involved in normal blue-light-induced chloroplast movements in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    NM_001334250.1
    NM_105355.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within chloroplast accumulation movement IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within chloroplast avoidance movement IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to blue light IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    PLASTID MOVEMENT IMPAIRED protein (DUF827)
    NP_176856.1
    • Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G38150.1); Has 84275 Blast hits to 48824 proteins in 2535 species: Archae - 1385; Bacteria - 13811; Metazoa - 38158; Fungi - 6970; Plants - 4830; Viruses - 207; Other Eukaryotes - 18914 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24933777..24936512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105355.3 → NP_176856.1  PLASTID MOVEMENT IMPAIRED protein (DUF827) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176856.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9N6
      UniProtKB/TrEMBL
      A0A178WIG7, A0A7G2E6Z7
      Conserved Domains (1) summary
      COG1196
      Location:57 → 422
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_001334250.1 → NP_001320449.1  PLASTID MOVEMENT IMPAIRED protein (DUF827) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9N6
      UniProtKB/TrEMBL
      A0A178WIG7, A0A7G2E6Z7
      Conserved Domains (1) summary
      COG1196
      Location:57 → 422
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9N6.1

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