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    transmembrane protein, putative (DUF594) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834589, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transmembrane protein, putative (DUF594)
    Primary source
    TAIR:AT5G45530
    Locus tag
    AT5G45530
    See related
    Araport:AT5G45530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MFC19.20; MFC19_20
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (18454188..18457303, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene transmembrane protein, putative (DUF594) Neighboring gene Mob1/phocein family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123921.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein, putative (DUF594)
    NP_199366.1
    • Protein of unknown function (DUF594); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45470.1); Has 1338 Blast hits to 867 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18454188..18457303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123921.3 → NP_199366.1  transmembrane protein, putative (DUF594) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199366.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178USQ3, Q9FHI3
      Conserved Domains (2) summary
      pfam04578
      Location:724 → 778
      DUF594; Protein of unknown function, DUF594
      pfam13968
      Location:51 → 393
      DUF4220; Domain of unknown function (DUF4220)
    Nucleotide Protein
    Heading Accession and Version

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