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    RLK1 receptor-like protein kinase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836211, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLK1
    Official Full Name
    receptor-like protein kinase 1
    Primary source
    TAIR:AT5G60900
    Locus tag
    AT5G60900
    See related
    Araport:AT5G60900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    receptor-like protein kinase 1
    Summary
    Encodes a receptor-like protein kinase.
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    Genomic context

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    See RLK1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (24498369..24501770, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene breaking of asymmetry in the stomatal lineage Neighboring gene myb domain protein 34 Neighboring gene AGAMOUS-like 8 Neighboring gene COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Direct binding of a plant LysM receptor-like kinase, LysM RLK1/CERK1, to chitin in vitro. Iizasa E, et al. J Biol Chem, 2010 Jan 29. PMID 19951949, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Arabidopsis LysM receptor-like kinase, LysM RLK1/CERK1, binds to chitin in vitro
      Title: Direct binding of a plant LysM receptor-like kinase, LysM RLK1/CERK1, to chitin in vitro.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001345434.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor-like protein kinase 1
    NP_001318851.1
    • receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24498369..24501770 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345434.1 → NP_001318851.1  receptor-like protein kinase 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4K0I9, Q39202, Q8H7E0, Q9SAR9
    Nucleotide Protein
    Heading Accession and Version

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