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    organic solute transporter ostalpha protein (DUF300) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832714, updated on 18-Sep-2024

    Summary

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    Official Full Name
    organic solute transporter ostalpha protein (DUF300)
    Primary source
    TAIR:AT5G26740
    Locus tag
    AT5G26740
    See related
    Araport:AT5G26740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (9291839..9294860)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Putative membrane lipoprotein Neighboring gene Putative membrane lipoprotein Neighboring gene DEAD box RNA helicase (RH3) Neighboring gene uncharacterized protein Neighboring gene Fasciclin-like arabinogalactan family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001085156.2
    NM_180540.3
    NM_203107.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    organic solute transporter ostalpha protein (DUF300)
    NP_001078625.1
    • Protein of unknown function (DUF300); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT3G05940.1); Has 921 Blast hits to 913 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 348; Fungi - 193; Plants - 245; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
    NP_850871.1
    • Protein of unknown function (DUF300); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT3G05940.1); Has 921 Blast hits to 913 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 348; Fungi - 193; Plants - 245; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
    NP_974836.1
    • Protein of unknown function (DUF300); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT3G05940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      9291839..9294860
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_203107.3 → NP_974836.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974836.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULL2, O65254, Q949Z2
      Conserved Domains (1) summary
      pfam03619
      Location:11 → 268
      Solute_trans_a; Organic solute transporter Ostalpha

    2. NM_180540.3 → NP_850871.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850871.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULL2, O65254, Q949Z2
      Conserved Domains (1) summary
      pfam03619
      Location:11 → 268
      Solute_trans_a; Organic solute transporter Ostalpha

    3. NM_001085156.2 → NP_001078625.1  organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078625.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULL2, O65254, Q949Z2
      Conserved Domains (1) summary
      pfam03619
      Location:11 → 268
      Solute_trans_a; Organic solute transporter Ostalpha
    Nucleotide Protein
    Heading Accession and Version

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