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    CHX12 cation/H+ exchanger 12 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823625, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CHX12
    Official Full Name
    cation/H+ exchanger 12
    Primary source
    TAIR:AT3G44910
    Locus tag
    AT3G44910
    See related
    Araport:AT3G44910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCHX12; cation/H+ exchanger 12
    Summary
    member of Putative Na+/H+ antiporter family
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    Genomic context

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    See CHX12 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (16392064..16394579, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ribosomal protein L9 Neighboring gene cation/H+ exchanger 4 Neighboring gene cation/H+ exchanger 11 Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables sodium:proton antiporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cation/H+ exchanger 12
    NP_190077.2
    • cation/H+ exchanger 12 (CHX12); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 10 (TAIR:AT3G44930.1); Has 1561 Blast hits to 1533 proteins in 481 species: Archae - 61; Bacteria - 809; Metazoa - 0; Fungi - 120; Plants - 525; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      16392064..16394579 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114360.2 → NP_190077.2  cation/H+ exchanger 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190077.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FYC0
      UniProtKB/TrEMBL
      A0A5S9XIE4, A0A654FEQ8
      Conserved Domains (2) summary
      PLN03159
      Location:17 → 754
      PLN03159; cation/H(+) antiporter 15; Provisional
      cl01133
      Location:61 → 442
      Na_H_Exchanger; Sodium/hydrogen exchanger family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FYC0.2

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