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    structural maintenance of chromosomes protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827436, updated on 18-Sep-2024

    Summary

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    Official Full Name
    structural maintenance of chromosomes protein
    Primary source
    TAIR:AT4G17240
    Locus tag
    AT4G17240
    See related
    Araport:AT4G17240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL4655C; FCAALL.387
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (9666439..9668507, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene microtubule-associated proteins 70-5 Neighboring gene SCARECROW-like 13 Neighboring gene uncharacterized protein Neighboring gene RING/U-box superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in Arabidopsis. Frerigmann H, et al. Plant Physiol, 2014 Sep. PMID 25049362, Free PMC Article
    2. Toward an interaction map of the two-component signaling pathway of Arabidopsis thaliana. Dortay H, et al. J Proteome Res, 2008 Sep. PMID 18642946
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001203819.1
    NM_117829.9

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    structural maintenance of chromosomes protein
    NP_001190748.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages.
    NP_193457.5
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; Has 1142 Blast hits to 1055 proteins in 252 species: Archae - 22; Bacteria - 318; Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other Eukaryotes - 396 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9666439..9668507 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117829.9 → NP_193457.5  structural maintenance of chromosomes protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193457.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V511, F4JNF8, Q8GYV0
      Conserved Domains (1) summary
      cl27170
      Location:78 → 185
      DUF460; Protein of unknown function (DUF460)

    2. NM_001203819.1 → NP_001190748.1  structural maintenance of chromosomes protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190748.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JNF7, Q8GYV0
    Nucleotide Protein
    Heading Accession and Version

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