U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PAB7 poly(A) binding protein 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818238, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PAB7
    Official Full Name
    poly(A) binding protein 7
    Primary source
    TAIR:AT2G36660
    Locus tag
    AT2G36660
    See related
    Araport:AT2G36660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13K3.6; F13K3_6; poly(A) binding protein 7
    Summary
    polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PAB7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Sequence:
    Chromosome: 2; NC_003071.7 (15361321..15364398, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene embryonic cell protein 63 Neighboring gene ncRNA Neighboring gene CHUP1-like protein Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene Modifier of rudimentary (Mod(r)) protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_129221.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables translation initiation factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    poly(A) binding protein 7
    NP_181204.1
    • poly(A) binding protein 7 (PAB7); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 517049 Blast hits to 488607 proteins in 21541 species: Archae - 10464; Bacteria - 293370; Metazoa - 110143; Fungi - 18083; Plants - 34749; Viruses - 34404; Other Eukaryotes - 15836 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15361321..15364398 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129221.2 → NP_181204.1  poly(A) binding protein 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181204.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZQA8
      UniProtKB/TrEMBL
      A0A178VVZ0, A0A5S9X4I8, A0A654EZI4
      Conserved Domains (1) summary
      TIGR01628
      Location:24 → 582
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZQA8.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools