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    Cation efflux family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844290, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cation efflux family protein
    Primary source
    TAIR:AT1G79520
    Locus tag
    AT1G79520
    See related
    Araport:AT1G79520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T8K14.6; T8K14_6
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (29911381..29914967, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene hypothetical protein (DUF2358) Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene glyceraldehyde-3-phosphate dehydrogenase of plastid 1 Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001198508.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Cation efflux family protein
    NP_001185437.1
    • Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G16310.1).
    NP_178070.2
    • Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G16310.1); Has 4729 Blast hits to 4725 proteins in 1808 species: Archae - 169; Bacteria - 3819; Metazoa - 44; Fungi - 286; Plants - 206; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29911381..29914967 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106600.3 → NP_178070.2  Cation efflux family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178070.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SAJ7
      UniProtKB/TrEMBL
      A0A178WD03, A0A5S9WVT3, A0A654F1A4
      Conserved Domains (1) summary
      cl30791
      Location:102 → 389
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]

    2. NM_001334886.1 → NP_001320580.1  Cation efflux family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WD03, A0A178WEW0, A0A1P8AN90, A0A384KTH2
      Conserved Domains (1) summary
      cl30791
      Location:49 → 336
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]

    3. NM_001334885.1 → NP_001320579.1  Cation efflux family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WD03, A0A178WEW0, A0A1P8AN90, A0A384KTH2
      Conserved Domains (1) summary
      cl30791
      Location:49 → 336
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]

    4. NM_001198508.1 → NP_001185437.1  Cation efflux family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185437.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WD03, F4IF62
      Conserved Domains (3) summary
      COG0053
      Location:114 → 401
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]
      pfam01545
      Location:137 → 321
      Cation_efflux; Cation efflux family
      pfam16916
      Location:339 → 401
      ZT_dimer; Dimerization domain of Zinc Transporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SAJ7.2

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