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    Ribonuclease T2 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837982, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribonuclease T2 family protein
    Primary source
    TAIR:AT1G14210
    Locus tag
    AT1G14210
    See related
    Araport:AT1G14210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7A19.31; F7A19_31
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (4856778..4857975, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein Neighboring gene RING/U-box superfamily protein Neighboring gene Ribosomal L18p/L5e family protein Neighboring gene Ribonuclease T2 family protein Neighboring gene GDA1/CD39 nucleoside phosphatase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_101287.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ribonuclease T2 activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in secretory vesicle HDA PubMed 

    General protein information

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    Preferred Names
    Ribonuclease T2 family protein
    NP_563940.1
    • Ribonuclease T2 family protein; FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2321 Blast hits to 2320 proteins in 411 species: Archae - 0; Bacteria - 245; Metazoa - 291; Fungi - 229; Plants - 1455; Viruses - 6; Other Eukaryotes - 95 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4856778..4857975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101287.4 → NP_563940.1  Ribonuclease T2 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563940.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WND2, F4HUG9, Q7XA90
      Conserved Domains (1) summary
      cd01061
      Location:26 → 225
      RNase_T2_euk; Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far. This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf ...
    Nucleotide Protein
    Heading Accession and Version

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