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    AST56 STAS domain / Sulfate transporter family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844134, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AST56
    Official Full Name
    STAS domain / Sulfate transporter family
    Primary source
    TAIR:AT1G77990
    Locus tag
    AT1G77990
    See related
    Araport:AT1G77990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SULPHATE TRANSPORTER 2;2; SULTR2;2
    Summary
    cDNA encoding a sulfate transporter.
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    Genomic context

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    See AST56 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (29317767..29323352, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AGAMOUS-like 67 Neighboring gene repressor ROX1-like protein Neighboring gene AGAMOUS-like 66 Neighboring gene ncRNA Neighboring gene sulfate transporter 1;2 Neighboring gene tRNA modification GTPase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of SULTR2;2, encoding a low-affinity sulphur transporter, in the Arabidopsis bundle sheath and vein cells is mediated by a positive regulator. Kirschner S, et al. J Exp Bot, 2018 Sep 14. PMID 30032291, Free PMC Article
    2. Sulphur starvation induces the expression of microRNA-395 and one of its target genes but in different cell types. Kawashima CG, et al. Plant J, 2009 Jan. PMID 18801012
    3. The roles of three functional sulphate transporters involved in uptake and translocation of sulphate in Arabidopsis thaliana. Takahashi H, et al. Plant J, 2000 Jul. PMID 10929111
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Expression of SULTR2;2 in the bundle sheath and veins is underpinned by a highly redundant sequence that likely represents an ancient and conserved mechanism found in families as diverse as the Asteraceae and Brassicaceae.
      Title: Expression of SULTR2;2, encoding a low-affinity sulphur transporter, in the Arabidopsis bundle sheath and vein cells is mediated by a positive regulator.
    2. The mRNA level of a miR395 target gene, SULTR2;1, strongly increases during miR395 induction in roots.
      Title: Sulphur starvation induces the expression of microRNA-395 and one of its target genes but in different cell types.
    Submit: New GeneRIF Correction

    General gene information

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    NM_106448.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables secondary active sulfate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sulfate transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables sulfate transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within sulfate transmembrane transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    STAS domain / Sulfate transporter family
    NP_565165.2
    • AST56; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: slufate transporter 2;1 (TAIR:AT5G10180.1); Has 9792 Blast hits to 9696 proteins in 1853 species: Archae - 35; Bacteria - 5971; Metazoa - 1157; Fungi - 422; Plants - 555; Viruses - 0; Other Eukaryotes - 1652 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29317767..29323352 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106448.4 → NP_565165.2  STAS domain / Sulfate transporter family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565165.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64434, P92946, Q8LPG2, Q8VXW4, Q9SH01
      UniProtKB/TrEMBL
      A0A654ERG7
      Conserved Domains (2) summary
      TIGR00815
      Location:94 → 662
      sulP; high affinity sulphate transporter 1
      pfam01740
      Location:540 → 662
      STAS; STAS domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P92946.3

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