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    inter alpha-trypsin inhibitor, heavy chain-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843582, updated on 18-Sep-2024

    Summary

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    Official Full Name
    inter alpha-trypsin inhibitor, heavy chain-like protein
    Primary source
    TAIR:AT1G72500
    Locus tag
    AT1G72500
    See related
    Araport:AT1G72500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T10D10.3; T10D10_3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (27295147..27298715, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Lung seven transmembrane receptor family protein Neighboring gene uncharacterized protein Neighboring gene DUF1677 family protein (DUF1677) Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334536.1
    NM_001334537.1
    NM_105909.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    inter alpha-trypsin inhibitor, heavy chain-like protein
    NP_177394.2
    • LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: inter-alpha-trypsin inhibitor heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in 307 species: Archae - 6; Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27295147..27298715 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105909.3 → NP_177394.2  inter alpha-trypsin inhibitor, heavy chain-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177394.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654END3, F4IDC8, Q9C9E8
      Conserved Domains (2) summary
      cd01461
      Location:323 → 499
      vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
      TIGR03788
      Location:173 → 639
      marine_srt_targ; marine proteobacterial sortase target protein

    2. NM_001334536.1 → NP_001320782.1  inter alpha-trypsin inhibitor, heavy chain-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANW8, Q9C9E8

    3. NM_001334537.1 → NP_001320781.1  inter alpha-trypsin inhibitor, heavy chain-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANU9
    Nucleotide Protein
    Heading Accession and Version

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