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    Tic22-III Tic22-like family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821952, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Tic22-III
    Official Full Name
    Tic22-like family protein
    Primary source
    TAIR:AT3G23710
    Locus tag
    AT3G23710
    See related
    Araport:AT3G23710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtTic22-III; translocon at the inner envelope membrane of chloroplasts 22-III
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    Genomic context

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    See Tic22-III in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (8533848..8536541)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene Nucleic acid-binding proteins superfamily Neighboring gene SCR-like 13 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary, molecular and genetic analyses of Tic22 homologues in Arabidopsis thaliana chloroplasts. Kasmati AR, et al. PLoS One, 2013. PMID 23675512, Free PMC Article
    2. In vivo function of Tic22, a protein import component of the intermembrane space of chloroplasts. Rudolf M, et al. Mol Plant, 2013 May. PMID 23204504
    3. Tic32, an essential component in chloroplast biogenesis. Hörmann F, et al. J Biol Chem, 2004 Aug 13. PMID 15180984
    4. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The two Tic22 isoforms act redundantly in chloroplast protein import, and their function is non-essential but nonetheless required for normal chloroplast biogenesis, particularly during early plant development. [Tic22-III]
      Title: Evolutionary, molecular and genetic analyses of Tic22 homologues in Arabidopsis thaliana chloroplasts.
    2. Tic22 is directly involved in chloroplast preprotein import. [Tic22-III]
      Title: In vivo function of Tic22, a protein import component of the intermembrane space of chloroplasts.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001338654.1
    NM_113275.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Tic22-like family protein
    NP_189013.1
    • Tic22-like family protein; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tic22-like (InterPro:IPR007378); BEST Arabidopsis thaliana protein match is: Tic22-like family protein (TAIR:AT4G33350.1); Has 104 Blast hits to 104 proteins in 42 species: Archae - 0; Bacteria - 39; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8533848..8536541
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113275.3 → NP_189013.1  Tic22-like family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189013.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4J469, Q9LK46
      UniProtKB/TrEMBL
      A0A178V7Q4, A0A5S9XF21
      Conserved Domains (1) summary
      pfam04278
      Location:56 → 312
      Tic22; Tic22-like family

    2. NM_001338654.1 → NP_001325931.1  Tic22-like family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMQ7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4J469.1

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