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    MYB30 myb domain protein 30 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822525, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB30
    Official Full Name
    myb domain protein 30
    Primary source
    TAIR:AT3G28910
    Locus tag
    AT3G28910
    See related
    Araport:AT3G28910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATMYB30; myb domain protein 30
    Summary
    transcription factor myb homologue
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    Genomic context

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    See MYB30 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (10911132..10913190)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L34e superfamily protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene mini zinc finger 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MYB30 integrates light signals with antioxidant biosynthesis to regulate plant responses during postsubmergence recovery. Xie LJ, et al. New Phytol, 2023 Mar. PMID 36513604
    2. A MYB transcription factor regulates very-long-chain fatty acid biosynthesis for activation of the hypersensitive cell death response in Arabidopsis. Raffaele S, et al. Plant Cell, 2008 Mar. PMID 18326828, Free PMC Article
    3. Expression of the Arabidopsis transcription factor AtMYB30 is post-transcriptionally regulated. Froidure S, et al. Plant Physiol Biochem, 2010 Aug. PMID 20605724
    4. MYB30 Orchestrates Systemic Reactive Oxygen Signaling and Plant Acclimation. Fichman Y, et al. Plant Physiol, 2020 Oct. PMID 32699028, Free PMC Article
    5. S-nitrosylation influences the structure and DNA binding activity of AtMYB30 transcription factor from Arabidopsis thaliana. Tavares CP, et al. Biochim Biophys Acta, 2014 Apr. PMID 24583075

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. MIW1 participates in ABA signaling through the regulation of MYB30 in Arabidopsis.
      Title: MIW1 participates in ABA signaling through the regulation of MYB30 in Arabidopsis.
    2. Actin Depolymerization Factor ADF1 Regulated by MYB30 Plays an Important Role in Plant Thermal Adaptation.
      Title: Actin Depolymerization Factor ADF1 Regulated by MYB30 Plays an Important Role in Plant Thermal Adaptation.
    3. MYB30 integrates light signals with antioxidant biosynthesis to regulate plant responses during postsubmergence recovery.
      Title: MYB30 integrates light signals with antioxidant biosynthesis to regulate plant responses during postsubmergence recovery.
    4. MYB30 and ETHYLENE INSENEITIVE3 antagonistically regulate root hair growth and phosphorus uptake under phosphate deficiency in Arabidopsis.
      Title: MYB30 and ETHYLENE INSENEITIVE3 antagonistically regulate root hair growth and phosphorus uptake under phosphate deficiency in Arabidopsis.
    5. MYB30 and ETHYLENE INSENSITIVE3 antagonistically modulate root hair growth in Arabidopsis.
      Title: MYB30 and ETHYLENE INSENSITIVE3 antagonistically modulate root hair growth in Arabidopsis.
    6. MYB30 Orchestrates Systemic Reactive Oxygen Signaling and Plant Acclimation.
      Title: MYB30 Orchestrates Systemic Reactive Oxygen Signaling and Plant Acclimation.
    7. MYB30 Is a Key Negative Regulator of Arabidopsis Photomorphogenic Development That Promotes PIF4 and PIF5 Protein Accumulation in the Light.
      Title: MYB30 Is a Key Negative Regulator of Arabidopsis Photomorphogenic Development That Promotes PIF4 and PIF5 Protein Accumulation in the Light.
    8. SUMOylation of MYB30 enhances salt tolerance by elevating alternative respiration via transcriptionally upregulating AOX1a in Arabidopsis.
      Title: SUMOylation of MYB30 enhances salt tolerance by elevating alternative respiration via transcriptionally upregulating AOX1a in Arabidopsis.
    9. Data show that the RING-type ubiquitin E3 ligase RHA2b, which positively regulates abscisic acid (ABA) signaling, interacted with and ubiquitinated transcription factor MYB30 to modulate MYB30 stability.
      Title: The Ubiquitin E3 Ligase RHA2b Promotes Degradation of MYB30 in Abscisic Acid Signaling.
    10. showed that MYB30 is necessary for root growth regulation during defense responses
      Title: MYB30 links ROS signaling, root cell elongation, and plant immune responses.
    Submit: New GeneRIF Correction See all GeneRIFs (20)

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001338974.1
    NM_113812.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables sequence-specific double-stranded DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of photomorphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within plant-type hypersensitive response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to high light intensity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to hypoxia IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within very long-chain fatty acid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 30
    NP_189533.1
    • myb domain protein 30 (MYB30); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 9437 Blast hits to 8283 proteins in 550 species: Archae - 0; Bacteria - 9; Metazoa - 928; Fungi - 510; Plants - 5797; Viruses - 10; Other Eukaryotes - 2183 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10911132..10913190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113812.5 → NP_189533.1  myb domain protein 30 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189533.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SCU7
      UniProtKB/TrEMBL
      A0A178VDU0, A0A5S9XGL5, A0A654FBL8
      Conserved Domains (1) summary
      PLN03212
      Location:5 → 128
      PLN03212; Transcription repressor MYB5; Provisional

    2. NM_001338974.1 → NP_001326113.1  myb domain protein 30 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LNA4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SCU7.1

    Gene LinkOut

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