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    Terpenoid cyclases/Protein prenyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822602, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Terpenoid cyclases/Protein prenyltransferases superfamily protein
    Primary source
    TAIR:AT3G29410
    Locus tag
    AT3G29410
    See related
    Araport:AT3G29410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (11302431..11305198, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RS2-interacting KH protein Neighboring gene exocyst subunit exo70 family protein E1 Neighboring gene miscRNA Neighboring gene Terpenoid synthases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of a Dolabellane Type Diterpene Synthase and other Root-Expressed Diterpene Synthases in Arabidopsis. Wang Q, et al. Front Plant Sci, 2016. PMID 27933080, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001339024.1
    NM_113867.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables terpene synthase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables terpene synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in diterpenoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in terpenoid biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Terpenoid cyclases/Protein prenyltransferases superfamily protein
    NP_189587.1
    • Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1701 Blast hits to 1673 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1697; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      11302431..11305198 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113867.5 → NP_189587.1  Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189587.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84UU7, Q9LIA1
      UniProtKB/TrEMBL
      A0A654FC28
      Conserved Domains (1) summary
      cd00684
      Location:64 → 600
      Terpene_cyclase_plant_C1; Plant Terpene Cyclases, Class 1

    2. NM_001339024.1 → NP_001325487.1  Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LLD7, A0A654FC28
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LIA1.2

    Gene LinkOut

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