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    PME44 pectin methylesterase 44 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829458, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PME44
    Official Full Name
    pectin methylesterase 44
    Primary source
    TAIR:AT4G33220
    Locus tag
    AT4G33220
    See related
    Araport:AT4G33220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    A. THALIANA PECTIN METHYLESTERASE 44; ATPME44; F4I10.150; F4I10_150; pectin methylesterase 44
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    Genomic context

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    See PME44 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (16022269..16026428)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene myosin Neighboring gene F-box family protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily Neighboring gene 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A Neighboring gene ncRNA Neighboring gene eukaryotic translation initiation factor 3K

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis PECTIN METHYLESTERASEs contribute to immunity against Pseudomonas syringae. Bethke G, et al. Plant Physiol, 2014 Feb. PMID 24367018, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001342204.1
    NM_119476.7

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables enzyme inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pectinesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell wall modification IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within defense response to Gram-negative bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pectin catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    pectin methylesterase 44
    NP_567917.4
    • pectin methylesterase 44 (PME44); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2773 Blast hits to 2721 proteins in 324 species: Archae - 6; Bacteria - 597; Metazoa - 1; Fungi - 196; Plants - 1948; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16022269..16026428
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119476.7 → NP_567917.4  pectin methylesterase 44 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567917.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A1L4Y3, Q56WM4, Q94JL8, Q9SMY7
      UniProtKB/TrEMBL
      A0A178V0Y5, A0A5S9Y0E0
      Conserved Domains (3) summary
      PLN02201
      Location:1 → 525
      PLN02201; probable pectinesterase/pectinesterase inhibitor
      cd15799
      Location:2 → 156
      PMEI-like_4; plant invertase/pectin methylesterase inhibitor domain-containing protein
      pfam01095
      Location:212 → 509
      Pectinesterase; Pectinesterase

    2. NM_001342204.1 → NP_001328318.1  pectin methylesterase 44 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B4B4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SMY7.2

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