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    GLP10 germin-like protein 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825375, updated on 18-Sep-2024

    Summary

    Official Symbol
    GLP10
    Official Full Name
    germin-like protein 10
    Primary source
    TAIR:AT3G62020
    Locus tag
    AT3G62020
    See related
    Araport:AT3G62020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    germin-like protein 10
    Summary
    germin-like protein (GLP10)
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    Genomic context

    See GLP10 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (22971358..22972303, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene metal ion-binding protein Neighboring gene rotamase CYP 4 Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene Putative endonuclease or glycosyl hydrolase

    General gene information

    NM_116067.4
    NM_202748.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables manganese ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
     
    located_in plant-type cell wall HDA PubMed 

    General protein information

    Preferred Names
    germin-like protein 10
    NP_191761.1
    • germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 1676 Blast hits to 1670 proteins in 151 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 43; Plants - 1483; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
    NP_974477.1
    • germin-like protein 10 (GLP10); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein subfamily 2 member 2 precursor (TAIR:AT1G02335.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22971358..22972303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116067.4NP_191761.1  germin-like protein 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191761.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04352, Q9M263
      UniProtKB/TrEMBL
      A0A178VLQ9, A0A384LFT5, A0JQ09
      Conserved Domains (1) summary
      cd02241
      Location:23215
      cupin_OxOx; Oxalate oxidase (germin), cupin domain
    2. NM_202748.1NP_974477.1  germin-like protein 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974477.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q3EAG0
      Conserved Domains (1) summary
      pfam00190
      Location:32180
      Cupin_1; Cupin