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    ACI1 ALC-interacting protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831905, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ACI1
    Official Full Name
    ALC-interacting protein 1
    Primary source
    TAIR:AT5G01370
    Locus tag
    AT5G01370
    See related
    Araport:AT5G01370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ALC-interacting protein 1; T10O8.80; T10O8_80; TON1 Recruiting Motif 29; TRM29
    Summary
    Nuclear protein with a lysine-rich domain and a C-terminal serine-rich domain. Interacts with Alcatraz (ALC). ACI1 is mainly expressed in the vascular system. Involved in cell separation during fruit dehiscence.
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    Genomic context

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    See ACI1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (152446..154467)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene trichome birefringence-like protein (DUF828) Neighboring gene tRNA-Ala Neighboring gene Homeodomain-like superfamily protein Neighboring gene DNAJ heat shock family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel nuclear protein ALC-INTERACTING PROTEIN1 is expressed in vascular and mesocarp cells in Arabidopsis. Wang F, et al. J Integr Plant Biol, 2008 Jul. PMID 18713402
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The data indicates that ALC may interact with ACI1 and its homologs to control cell separation during fruit dehiscence in Arabidopsis. [ACI1]
      Title: Novel nuclear protein ALC-INTERACTING PROTEIN1 is expressed in vascular and mesocarp cells in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_120215.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within fruit dehiscence TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ALC-interacting protein 1
    NP_195757.1
    • ALC-interacting protein 1 (ACI1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      152446..154467
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120215.5 → NP_195757.1  ALC-interacting protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195757.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULT5, Q9M035
    Nucleotide Protein
    Heading Accession and Version

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